Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NBPF4Q96M43 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF4Q96M43 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF4Q96M43 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF4Q96M43 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.16■□□□□ 0.98
NBPF4Q96M43 HCG11-201ENST00000411553 5696 ntBASIC21.15■□□□□ 0.98
NBPF4Q96M43 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.15■□□□□ 0.98
NBPF4Q96M43 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 AC093525.8-201ENST00000624099 1342 ntBASIC21.15■□□□□ 0.98
NBPF4Q96M43 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 AC104989.1-201ENST00000519711 778 ntBASIC21.15■□□□□ 0.98
NBPF4Q96M43 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 AC106886.4-201ENST00000623557 2502 ntBASIC21.15■□□□□ 0.98
NBPF4Q96M43 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF4Q96M43 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF4Q96M43 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.14■□□□□ 0.98
NBPF4Q96M43 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF4Q96M43 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
NBPF4Q96M43 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.14■□□□□ 0.98
NBPF4Q96M43 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 TOMM22P5-201ENST00000416399 439 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 ACTG1P3-201ENST00000431775 1114 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 AC133539.2-201ENST00000604757 467 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 CU634019.7-201ENST00000624153 1185 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 FP236241.2-201ENST00000624906 1185 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF4Q96M43 PDIA3P1-201ENST00000471856 1510 ntBASIC21.14■□□□□ 0.97
NBPF4Q96M43 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF4Q96M43 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms