Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP6Q96FZ7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 IER3-202ENST00000376377 1350 ntBASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AC243591.1-201ENST00000452967 1364 ntBASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AC026396.1-201ENST00000419388 421 ntBASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 FAM86EP-206ENST00000510506 987 ntBASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms