Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC023141.5-201ENST00000458585 616 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC243562.2-201ENST00000561247 970 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC011477.6-201ENST00000604980 1927 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC009093.7-201ENST00000623853 1223 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 LINC02199-201ENST00000506655 2702 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TMEM54Q969K7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM54Q969K7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CNN2P11-201ENST00000429351 262 ntBASIC14.27□□□□□ -0.13
TMEM54Q969K7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.27□□□□□ -0.13
TMEM54Q969K7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 AC023511.2-201ENST00000618803 211 ntBASIC14.27□□□□□ -0.13
TMEM54Q969K7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM54Q969K7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM54Q969K7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 AC007950.2-201ENST00000615045 2347 ntBASIC14.26□□□□□ -0.13
TMEM54Q969K7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 AL139010.1-201ENST00000454878 894 ntBASIC14.26□□□□□ -0.13
TMEM54Q969K7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM54Q969K7 AC026150.2-201ENST00000564693 1156 ntBASIC14.26□□□□□ -0.13
TMEM54Q969K7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 AC018529.1-201ENST00000613063 361 ntBASIC14.26□□□□□ -0.13
TMEM54Q969K7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM54Q969K7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms