Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF1Q92994 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRF1Q92994 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF1Q92994 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 AP003680.1-201ENST00000598970 3660 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BRF1Q92994 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 AC105917.1-201ENST00000506637 2539 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 ELL2P1-201ENST00000413990 1906 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BRF1Q92994 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.12■□□□□ 0.65
BRF1Q92994 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.12■□□□□ 0.65
BRF1Q92994 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 MIR4321-201ENST00000592276 80 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.12■□□□□ 0.65
BRF1Q92994 SPTSSB-204ENST00000617024 1292 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
BRF1Q92994 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
BRF1Q92994 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF1Q92994 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BRF1Q92994 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BRF1Q92994 PRAL-201ENST00000624952 3286 ntBASIC19.12■□□□□ 0.65
BRF1Q92994 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRF1Q92994 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF1Q92994 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BRF1Q92994 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF1Q92994 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 CEND1P1-201ENST00000451006 455 ntBASIC19.11■□□□□ 0.65
BRF1Q92994 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF1Q92994 AC098859.1-201ENST00000502915 1238 ntBASIC19.11■□□□□ 0.65
BRF1Q92994 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF1Q92994 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF1Q92994 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF1Q92994 AP000842.3-202ENST00000569238 1080 ntBASIC19.11■□□□□ 0.65
BRF1Q92994 AC005829.1-201ENST00000570002 483 ntBASIC19.11■□□□□ 0.65
BRF1Q92994 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF1Q92994 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF1Q92994 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF1Q92994 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF1Q92994 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF1Q92994 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF1Q92994 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BRF1Q92994 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BRF1Q92994 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BRF1Q92994 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRF1Q92994 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
BRF1Q92994 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF1Q92994 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF1Q92994 HAUS4P1-201ENST00000406739 1145 ntBASIC19.1■□□□□ 0.65
BRF1Q92994 DNAJB3-201ENST00000446806 729 ntBASIC19.1■□□□□ 0.65
BRF1Q92994 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRF1Q92994 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
BRF1Q92994 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF1Q92994 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
BRF1Q92994 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF1Q92994 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.1■□□□□ 0.65
BRF1Q92994 AC010327.4-202ENST00000591484 748 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms