Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL139010.1-201ENST00000454878 894 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AP000769.1-203ENST00000637245 208 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CYP4F24P-201ENST00000586049 1580 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AL353708.1-201ENST00000567904 1257 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 KRT8P29-201ENST00000420409 1371 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC135050.7-201ENST00000624508 2218 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC005622.1-201ENST00000636801 1703 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC061975.2-201ENST00000581722 295 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC138466.5-201ENST00000624002 808 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 OR52X1P-201ENST00000446117 914 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AC112694.1-202ENST00000540985 943 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 MIR3180-2-201ENST00000581748 88 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 LINC01115-203ENST00000606068 577 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CROCCP3-202ENST00000420820 1947 ntBASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE2Q8WXH0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 RNA5SP410-201ENST00000516285 106 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC026979.3-201ENST00000607315 403 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MIR6746-201ENST00000620971 63 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC010335.3-201ENST00000623767 531 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC002044.2-201ENST00000624910 970 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 ACKR1-201ENST00000368121 1240 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms