Protein–RNA interactions for Protein: Q8WUM4

PDCD6IP, Programmed cell death 6-interacting protein, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IPQ8WUM4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AL592309.1-201ENST00000443127 649 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 DNAJB3-202ENST00000449667 1266 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AC243562.1-201ENST00000560672 389 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AC022145.2-201ENST00000598203 171 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AC105339.1-204ENST00000636249 355 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 MTHFR-217ENST00000641820 1569 ntBASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDCD6IPQ8WUM4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC005237.2-201ENST00000434368 219 ntBASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 ME2P1-201ENST00000426028 1970 ntBASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AC007950.2-201ENST00000615045 2347 ntBASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDCD6IPQ8WUM4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PDCD6IPQ8WUM4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.64■□□□□ 0.26
PDCD6IPQ8WUM4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDCD6IPQ8WUM4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms