Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PKD1P1-201ENST00000458669 6805 ntBASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 AP000812.2-201ENST00000538934 718 ntBASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 MIR6727-201ENST00000620702 65 ntBASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3TC2Q8TF17 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AL442647.2-201ENST00000429864 857 ntBASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AP001889.1-201ENST00000525414 633 ntBASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AL359711.2-201ENST00000563105 872 ntBASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 RN7SL560P-201ENST00000577943 264 ntBASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 KRT8P39-201ENST00000396270 1433 ntBASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3TC2Q8TF17 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 SNX33P1-201ENST00000592116 1762 ntBASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 AC016396.2-201ENST00000562575 1417 ntBASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 MIR663B-201ENST00000408361 115 ntBASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.27■□□□□ 0.52
SH3TC2Q8TF17 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms