Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TSPY16P-201ENST00000449843 468 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RN7SL204P-201ENST00000582831 262 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.26■□□□□ 0.19
CHD5Q8TDI0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHD5Q8TDI0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 SLC7A15P-201ENST00000424028 1363 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AC002472.2-201ENST00000442739 958 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 SERBP1P3-201ENST00000459980 809 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AC009407.1-201ENST00000568958 598 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.25■□□□□ 0.19
CHD5Q8TDI0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD5Q8TDI0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 IGHV3-42-201ENST00000520410 361 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 FAM8A3P-201ENST00000427218 844 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 MIR6069-201ENST00000620069 79 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AC022188.1-201ENST00000620960 1664 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AC018695.7-201ENST00000624587 2492 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 AC011477.6-201ENST00000604980 1927 ntBASIC16.24■□□□□ 0.19
CHD5Q8TDI0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD5Q8TDI0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms