Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AC112504.1-201ENST00000623415 1841 ntBASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC4Q8N9L1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC4Q8N9L1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC4Q8N9L1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZIC4Q8N9L1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 LINC02199-201ENST00000506655 2702 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AL139010.1-201ENST00000454878 894 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AC015911.4-201ENST00000588022 1070 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 RN7SL828P-201ENST00000607615 303 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AL133215.2-201ENST00000609242 977 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 LINC02447-202ENST00000501888 2146 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AC018695.7-201ENST00000624587 2492 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 AC010491.1-201ENST00000563101 2797 ntBASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.33□□□□□ -0.12
ZIC4Q8N9L1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms