Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C3orf56Q8N813 PDIA3P1-201ENST00000471856 1510 ntBASIC12.72□□□□□ -0.37
C3orf56Q8N813 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
C3orf56Q8N813 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C3orf56Q8N813 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
C3orf56Q8N813 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.71□□□□□ -0.37
C3orf56Q8N813 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC243960.2-201ENST00000600996 747 ntBASIC12.71□□□□□ -0.37
C3orf56Q8N813 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AL022328.1-201ENST00000610050 478 ntBASIC12.71□□□□□ -0.37
C3orf56Q8N813 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C3orf56Q8N813 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
C3orf56Q8N813 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
C3orf56Q8N813 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
C3orf56Q8N813 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 RNA5SP412-201ENST00000516234 123 ntBASIC12.7□□□□□ -0.38
C3orf56Q8N813 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 SLC25A47P1-201ENST00000531577 414 ntBASIC12.7□□□□□ -0.38
C3orf56Q8N813 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
C3orf56Q8N813 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C3orf56Q8N813 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms