Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 CETN4P-206ENST00000642099 2168 ntBASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAM1L1Q8N609 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 MIR943-201ENST00000401286 94 ntBASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 HLA-V-204ENST00000476601 1289 ntBASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AL589739.1-201ENST00000607720 493 ntBASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AC073592.8-201ENST00000624126 511 ntBASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 AL136982.4-201ENST00000437689 1740 ntBASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAM1L1Q8N609 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 CYP4F24P-201ENST00000586049 1580 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PCDH8P1-201ENST00000428983 2773 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 AC004987.2-201ENST00000395959 1148 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 SPDYE17-201ENST00000412399 783 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 TREML5P-201ENST00000421694 576 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 AL079307.3-201ENST00000556114 283 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 SPDYE12P-201ENST00000618416 771 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 AC124067.4-201ENST00000519691 2379 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16■□□□□ 0.15
TRAM1L1Q8N609 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAM1L1Q8N609 FO538757.1-201ENST00000623083 1397 ntBASIC16■□□□□ 0.15
TRAM1L1Q8N609 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms