Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS52Q8N1B4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 MTND6P24-201ENST00000440466 518 ntBASIC17.63■□□□□ 0.41
VPS52Q8N1B4 SPTLC1P1-201ENST00000447199 261 ntBASIC17.63■□□□□ 0.41
VPS52Q8N1B4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 AL596325.1-201ENST00000563991 1082 ntBASIC17.63■□□□□ 0.41
VPS52Q8N1B4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS52Q8N1B4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AC092068.3-201ENST00000587894 2016 ntBASIC17.62■□□□□ 0.41
VPS52Q8N1B4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AL162727.3-201ENST00000635661 2787 ntBASIC17.62■□□□□ 0.41
VPS52Q8N1B4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 FAM220BP-201ENST00000377689 816 ntBASIC17.62■□□□□ 0.41
VPS52Q8N1B4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 CR383656.12-201ENST00000549567 513 ntBASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms