Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.62■□□□□ 0.25
SIX5Q8N196 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.62■□□□□ 0.25
SIX5Q8N196 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.62■□□□□ 0.25
SIX5Q8N196 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.62■□□□□ 0.25
SIX5Q8N196 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 KLF2P4-201ENST00000451959 1225 ntBASIC16.62■□□□□ 0.25
SIX5Q8N196 USP32P1-208ENST00000506594 1164 ntBASIC16.62■□□□□ 0.25
SIX5Q8N196 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.62■□□□□ 0.25
SIX5Q8N196 TIMM17BP1-201ENST00000545713 516 ntBASIC16.62■□□□□ 0.25
SIX5Q8N196 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.62■□□□□ 0.25
SIX5Q8N196 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SIX5Q8N196 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 AC020907.1-201ENST00000616460 1350 ntBASIC16.62■□□□□ 0.25
SIX5Q8N196 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 PDIA3P1-201ENST00000471856 1510 ntBASIC16.61■□□□□ 0.25
SIX5Q8N196 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SIX5Q8N196 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SIX5Q8N196 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 AC004945.1-201ENST00000416738 983 ntBASIC16.61■□□□□ 0.25
SIX5Q8N196 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.61■□□□□ 0.25
SIX5Q8N196 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 AC092337.1-201ENST00000568699 1129 ntBASIC16.61■□□□□ 0.25
SIX5Q8N196 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 AC233724.13-201ENST00000598383 410 ntBASIC16.61■□□□□ 0.25
SIX5Q8N196 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 AC093525.8-201ENST00000624099 1342 ntBASIC16.61■□□□□ 0.25
SIX5Q8N196 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SIX5Q8N196 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIX5Q8N196 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.61■□□□□ 0.25
SIX5Q8N196 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX5Q8N196 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SIX5Q8N196 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX5Q8N196 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.6■□□□□ 0.25
SIX5Q8N196 AL355994.2-201ENST00000447882 704 ntBASIC16.6■□□□□ 0.25
SIX5Q8N196 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SIX5Q8N196 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.6■□□□□ 0.25
SIX5Q8N196 AC061975.2-201ENST00000581722 295 ntBASIC16.6■□□□□ 0.25
SIX5Q8N196 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.6■□□□□ 0.25
SIX5Q8N196 AC244093.1-201ENST00000610837 814 ntBASIC16.6■□□□□ 0.25
SIX5Q8N196 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms