Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 SPDYE19P-201ENST00000338590 713 ntBASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 AL589987.1-201ENST00000453380 819 ntBASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 API5-211ENST00000534695 560 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 AC005225.4-201ENST00000557330 545 ntBASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE3BQ7Z3V4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AC004987.2-201ENST00000395959 1148 ntBASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 DOC2GP-202ENST00000514950 1163 ntBASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AC025048.3-201ENST00000590609 569 ntBASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 AC005702.4-201ENST00000618393 416 ntBASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE3BQ7Z3V4 BNIP3P1-202ENST00000550043 1585 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 FO393414.2-201ENST00000405153 598 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AC005034.1-201ENST00000426657 489 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AC243562.2-201ENST00000561247 970 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 SRD5A3P1-201ENST00000603021 949 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AC239800.4-201ENST00000603712 296 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AL035252.4-201ENST00000624174 288 ntBASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms