Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 AC112191.1-201ENST00000523689 701 ntBASIC18.3■□□□□ 0.52
SHC4Q6S5L8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHC4Q6S5L8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 AC091812.2-201ENST00000619081 385 ntBASIC18.29■□□□□ 0.52
SHC4Q6S5L8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 CROCCP1-201ENST00000426910 5675 ntBASIC18.29■□□□□ 0.52
SHC4Q6S5L8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC4Q6S5L8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AC136621.1-201ENST00000624017 2304 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AC103702.1-201ENST00000548801 2630 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 SSR4P1-203ENST00000599569 2260 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AL355306.1-201ENST00000415580 579 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AC023274.1-201ENST00000418278 595 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 ADH5P3-201ENST00000433842 1137 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.28■□□□□ 0.52
SHC4Q6S5L8 AC061975.2-201ENST00000581722 295 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms