Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF43Q68DV7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 AC236430.1-201ENST00000402231 743 ntBASIC17.08■□□□□ 0.32
RNF43Q68DV7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF43Q68DV7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF43Q68DV7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 AL671710.1-201ENST00000610245 2349 ntBASIC17.07■□□□□ 0.32
RNF43Q68DV7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 AL645728.1-201ENST00000366221 2101 ntBASIC17.07■□□□□ 0.32
RNF43Q68DV7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.07■□□□□ 0.32
RNF43Q68DV7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF43Q68DV7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF43Q68DV7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 MTHFR-217ENST00000641820 1569 ntBASIC17.06■□□□□ 0.32
RNF43Q68DV7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AC002472.2-201ENST00000442739 958 ntBASIC17.06■□□□□ 0.32
RNF43Q68DV7 CNN2P2-201ENST00000443536 909 ntBASIC17.06■□□□□ 0.32
RNF43Q68DV7 CNN2P3-201ENST00000450201 906 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms