Protein–RNA interactions for Protein: Q5JUK3

KCNT1, Potassium channel subfamily T member 1, humanhuman

Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1Q5JUK3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AP003680.1-201ENST00000598970 3660 ntBASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AL139400.1-201ENST00000366220 510 ntBASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AC099522.2-201ENST00000607001 744 ntBASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 AC091812.2-201ENST00000619081 385 ntBASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNT1Q5JUK3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 WASH6P-202ENST00000359512 1437 ntBASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 AC093028.1-201ENST00000622998 982 ntBASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 AC092902.6-201ENST00000641783 218 ntBASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KCNT1Q5JUK3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 PRAL-201ENST00000624952 3286 ntBASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 AC002056.1-201ENST00000395613 760 ntBASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 AC112191.1-201ENST00000523689 701 ntBASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 AL161645.1-201ENST00000622716 1255 ntBASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNT1Q5JUK3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms