Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.82□□□□□ -0.2
SRSF4Q08170 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SRSF4Q08170 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.82□□□□□ -0.2
SRSF4Q08170 KRT18P27-201ENST00000427733 1299 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.82□□□□□ -0.2
SRSF4Q08170 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
SRSF4Q08170 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SRSF4Q08170 SNHG9-202ENST00000564014 471 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 AC005829.1-201ENST00000570002 483 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
SRSF4Q08170 MIR4469-201ENST00000583919 79 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 PMPCAP1-201ENST00000508114 1576 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.82□□□□□ -0.2
SRSF4Q08170 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRSF4Q08170 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRSF4Q08170 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.82□□□□□ -0.2
SRSF4Q08170 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SRSF4Q08170 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
SRSF4Q08170 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.81□□□□□ -0.2
SRSF4Q08170 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 AC122714.2-201ENST00000502787 707 ntBASIC13.81□□□□□ -0.2
SRSF4Q08170 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.81□□□□□ -0.2
SRSF4Q08170 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRSF4Q08170 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.81□□□□□ -0.2
SRSF4Q08170 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.81□□□□□ -0.2
SRSF4Q08170 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SRSF4Q08170 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRSF4Q08170 AC026748.1-201ENST00000624349 3251 ntBASIC13.81□□□□□ -0.2
SRSF4Q08170 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.8□□□□□ -0.2
SRSF4Q08170 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SRSF4Q08170 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRSF4Q08170 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRSF4Q08170 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.8□□□□□ -0.2
SRSF4Q08170 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
SRSF4Q08170 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRSF4Q08170 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.8□□□□□ -0.2
SRSF4Q08170 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SRSF4Q08170 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms