Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 AC232323.1-201ENST00000540724 2099 ntBASIC13.78□□□□□ -0.2
SSBP1Q04837 REXO1L5P-201ENST00000622260 2098 ntBASIC13.78□□□□□ -0.2
SSBP1Q04837 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 AC087499.1-201ENST00000418141 1075 ntBASIC13.78□□□□□ -0.2
SSBP1Q04837 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 AL671277.2-201ENST00000458060 996 ntBASIC13.78□□□□□ -0.2
SSBP1Q04837 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 AL589182.2-201ENST00000619332 1049 ntBASIC13.78□□□□□ -0.2
SSBP1Q04837 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP1Q04837 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SSBP1Q04837 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP1Q04837 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.77□□□□□ -0.2
SSBP1Q04837 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSBP1Q04837 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SSBP1Q04837 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 MIR600HG-201ENST00000449175 5984 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.77□□□□□ -0.21
SSBP1Q04837 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP1Q04837 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 AC126365.1-201ENST00000578585 1514 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 LINC00528-201ENST00000600723 2160 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 AC106881.1-201ENST00000605849 3329 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 AL121672.3-201ENST00000608644 468 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 AC007191.1-201ENST00000623179 2995 ntBASIC13.77□□□□□ -0.21
SSBP1Q04837 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SSBP1Q04837 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP1Q04837 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms