Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.54□□□□□ -0.08
H3F3AP84243 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
H3F3AP84243 ALG1L8P-201ENST00000533887 760 ntBASIC14.54□□□□□ -0.08
H3F3AP84243 RARRES2P9-201ENST00000565168 469 ntBASIC14.54□□□□□ -0.08
H3F3AP84243 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.54□□□□□ -0.08
H3F3AP84243 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 AL596442.2-201ENST00000610240 980 ntBASIC14.54□□□□□ -0.08
H3F3AP84243 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
H3F3AP84243 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.54□□□□□ -0.08
H3F3AP84243 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H3F3AP84243 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
H3F3AP84243 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3AP84243 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 CICP6-201ENST00000457191 2729 ntBASIC14.53□□□□□ -0.08
H3F3AP84243 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
H3F3AP84243 HLA-J-203ENST00000494367 1087 ntBASIC14.53□□□□□ -0.08
H3F3AP84243 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3AP84243 AL512356.2-201ENST00000546955 174 ntBASIC14.53□□□□□ -0.08
H3F3AP84243 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.53□□□□□ -0.08
H3F3AP84243 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
H3F3AP84243 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3AP84243 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3AP84243 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.52□□□□□ -0.08
H3F3AP84243 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.52□□□□□ -0.08
H3F3AP84243 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
H3F3AP84243 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.52□□□□□ -0.08
H3F3AP84243 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3AP84243 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 MIR648-201ENST00000385046 94 ntBASIC14.52□□□□□ -0.09
H3F3AP84243 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3AP84243 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3AP84243 RPS8P6-201ENST00000426177 609 ntBASIC14.52□□□□□ -0.09
H3F3AP84243 RBPMS2P1-201ENST00000437762 623 ntBASIC14.52□□□□□ -0.09
H3F3AP84243 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.52□□□□□ -0.09
H3F3AP84243 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
H3F3AP84243 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
H3F3AP84243 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.52□□□□□ -0.09
H3F3AP84243 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.52□□□□□ -0.09
H3F3AP84243 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3AP84243 AP001059.3-201ENST00000619053 235 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms