Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 PKD1P5-201ENST00000532415 10291 ntBASIC16.32■□□□□ 0.2
AP1S1P61966 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
AP1S1P61966 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP1S1P61966 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.32■□□□□ 0.2
AP1S1P61966 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.32■□□□□ 0.2
AP1S1P61966 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.32■□□□□ 0.2
AP1S1P61966 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.32■□□□□ 0.2
AP1S1P61966 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
AP1S1P61966 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP1S1P61966 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
AP1S1P61966 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 AC069120.2-201ENST00000524091 540 ntBASIC16.32■□□□□ 0.2
AP1S1P61966 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
AP1S1P61966 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S1P61966 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP1S1P61966 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 CYMP-203ENST00000474680 1263 ntBASIC16.31■□□□□ 0.2
AP1S1P61966 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.31■□□□□ 0.2
AP1S1P61966 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.31■□□□□ 0.2
AP1S1P61966 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 AL158211.3-201ENST00000607385 239 ntBASIC16.31■□□□□ 0.2
AP1S1P61966 AL133215.2-201ENST00000609242 977 ntBASIC16.31■□□□□ 0.2
AP1S1P61966 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S1P61966 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S1P61966 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP1S1P61966 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
AP1S1P61966 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 CETN4P-206ENST00000642099 2168 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 AL691432.1-201ENST00000596308 1422 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms