Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERVFC1P60507 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERVFC1P60507 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERVFC1P60507 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ERVFC1P60507 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERVFC1P60507 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 KRT8P44-201ENST00000441609 1350 ntBASIC16.93■□□□□ 0.3
ERVFC1P60507 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.93■□□□□ 0.3
ERVFC1P60507 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.93■□□□□ 0.3
ERVFC1P60507 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.93■□□□□ 0.3
ERVFC1P60507 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.93■□□□□ 0.3
ERVFC1P60507 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.93■□□□□ 0.3
ERVFC1P60507 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
ERVFC1P60507 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERVFC1P60507 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERVFC1P60507 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ERVFC1P60507 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 AC020916.1-201ENST00000587762 1774 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
ERVFC1P60507 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.92■□□□□ 0.3
ERVFC1P60507 AC105020.1-201ENST00000435356 2205 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.92■□□□□ 0.3
ERVFC1P60507 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.92■□□□□ 0.3
ERVFC1P60507 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 KRT18P64-201ENST00000434946 1219 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.92■□□□□ 0.3
ERVFC1P60507 RNA5SP412-201ENST00000516234 123 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 AP001889.1-201ENST00000525414 633 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.92■□□□□ 0.3
ERVFC1P60507 AC243562.2-201ENST00000561247 970 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.92■□□□□ 0.3
ERVFC1P60507 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.92■□□□□ 0.3
ERVFC1P60507 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 RNF216P1-203ENST00000404404 2427 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 UBALD1-205ENST00000590891 2641 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ERVFC1P60507 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.92■□□□□ 0.3
ERVFC1P60507 TUBB1P2-201ENST00000422712 1306 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 TUBB1P1-201ENST00000503144 1300 ntBASIC16.92■□□□□ 0.3
ERVFC1P60507 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERVFC1P60507 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.91■□□□□ 0.3
ERVFC1P60507 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.91■□□□□ 0.3
ERVFC1P60507 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ERVFC1P60507 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
ERVFC1P60507 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ERVFC1P60507 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms