Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN12P56749 FAM86EP-206ENST00000510506 987 ntBASIC14.2□□□□□ -0.14
CLDN12P56749 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN12P56749 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN12P56749 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN12P56749 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.2□□□□□ -0.14
CLDN12P56749 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN12P56749 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN12P56749 PI4KAP1-204ENST00000612579 1703 ntBASIC14.2□□□□□ -0.14
CLDN12P56749 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN12P56749 AC005622.1-201ENST00000636801 1703 ntBASIC14.2□□□□□ -0.14
CLDN12P56749 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN12P56749 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 AL009178.2-201ENST00000597278 2719 ntBASIC14.2□□□□□ -0.14
CLDN12P56749 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN12P56749 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 AC092919.2-201ENST00000623631 1645 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN12P56749 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN12P56749 SLC25A6P2-201ENST00000497974 877 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.19□□□□□ -0.14
CLDN12P56749 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN12P56749 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 NKAPP1-205ENST00000585790 367 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 AL591684.3-201ENST00000605187 298 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 AL592424.1-201ENST00000563624 1536 ntBASIC14.19□□□□□ -0.14
CLDN12P56749 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN12P56749 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN12P56749 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN12P56749 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CLDN12P56749 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN12P56749 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 AC132008.2-207ENST00000454517 770 ntBASIC14.18□□□□□ -0.14
CLDN12P56749 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN12P56749 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDN12P56749 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 AC116407.4-201ENST00000623319 1061 ntBASIC14.18□□□□□ -0.14
CLDN12P56749 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN12P56749 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN12P56749 AC138035.3-201ENST00000622706 2791 ntBASIC14.18□□□□□ -0.14
CLDN12P56749 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN12P56749 SNX18-202ENST00000343017 3140 ntBASIC14.18□□□□□ -0.14
CLDN12P56749 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms