Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCS2P54868 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS2P54868 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS2P54868 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.6■□□□□ 0.57
HMGCS2P54868 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS2P54868 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS2P54868 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS2P54868 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMGCS2P54868 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 AL592424.1-201ENST00000563624 1536 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HMGCS2P54868 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCS2P54868 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 AC018665.1-201ENST00000622927 1362 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HMGCS2P54868 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCS2P54868 BNIP3P42-201ENST00000454982 569 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 AC104989.1-201ENST00000519711 778 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCS2P54868 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.59■□□□□ 0.57
HMGCS2P54868 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 BNIP3P29-201ENST00000598302 571 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 AC011447.5-201ENST00000616168 564 ntBASIC18.59■□□□□ 0.57
HMGCS2P54868 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS2P54868 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
HMGCS2P54868 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.58■□□□□ 0.57
HMGCS2P54868 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS2P54868 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS2P54868 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.57
HMGCS2P54868 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HMGCS2P54868 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS2P54868 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.58■□□□□ 0.57
HMGCS2P54868 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS2P54868 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.58■□□□□ 0.57
HMGCS2P54868 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS2P54868 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 BOLA2P3-201ENST00000404566 256 ntBASIC18.58■□□□□ 0.56
HMGCS2P54868 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCS2P54868 TARDBPP1-201ENST00000442013 1203 ntBASIC18.58■□□□□ 0.56
HMGCS2P54868 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCS2P54868 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.58■□□□□ 0.56
HMGCS2P54868 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.58■□□□□ 0.56
HMGCS2P54868 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.58■□□□□ 0.56
HMGCS2P54868 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.58■□□□□ 0.56
HMGCS2P54868 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HMGCS2P54868 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCS2P54868 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS2P54868 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGCS2P54868 KRT8P22-201ENST00000562317 1415 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HMGCS2P54868 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 AL442647.2-201ENST00000429864 857 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 KRT43P-201ENST00000434019 910 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms