Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC021097.1-201ENST00000607902 574 ntBASIC16.79■□□□□ 0.28
NEK3P51956 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.79■□□□□ 0.28
NEK3P51956 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.79■□□□□ 0.28
NEK3P51956 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
NEK3P51956 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.79■□□□□ 0.28
NEK3P51956 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.79■□□□□ 0.28
NEK3P51956 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
NEK3P51956 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEK3P51956 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.78■□□□□ 0.28
NEK3P51956 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
NEK3P51956 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.78■□□□□ 0.28
NEK3P51956 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.78■□□□□ 0.28
NEK3P51956 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.78■□□□□ 0.28
NEK3P51956 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.78■□□□□ 0.28
NEK3P51956 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.78■□□□□ 0.28
NEK3P51956 AC027796.2-201ENST00000575326 344 ntBASIC16.78■□□□□ 0.28
NEK3P51956 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NEK3P51956 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NEK3P51956 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEK3P51956 TSPY26P-202ENST00000565928 3884 ntBASIC16.78■□□□□ 0.28
NEK3P51956 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
NEK3P51956 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.77■□□□□ 0.28
NEK3P51956 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.77■□□□□ 0.28
NEK3P51956 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.77■□□□□ 0.28
NEK3P51956 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.77■□□□□ 0.28
NEK3P51956 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.77■□□□□ 0.28
NEK3P51956 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.77■□□□□ 0.28
NEK3P51956 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.77■□□□□ 0.28
NEK3P51956 DBET-201ENST00000630918 3363 ntBASIC16.77■□□□□ 0.28
NEK3P51956 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NEK3P51956 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NEK3P51956 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NEK3P51956 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
NEK3P51956 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NEK3P51956 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NEK3P51956 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NEK3P51956 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms