Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CDC34P49427 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.91□□□□□ -0.34
CDC34P49427 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
CDC34P49427 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC34P49427 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 SPDYE21P-201ENST00000413323 827 ntBASIC12.9□□□□□ -0.34
CDC34P49427 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.9□□□□□ -0.34
CDC34P49427 BX664615.1-201ENST00000443558 458 ntBASIC12.9□□□□□ -0.34
CDC34P49427 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC34P49427 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC34P49427 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.9□□□□□ -0.34
CDC34P49427 MIR4492-201ENST00000581627 80 ntBASIC12.9□□□□□ -0.34
CDC34P49427 MPDU1-223ENST00000582151 728 ntBASIC12.9□□□□□ -0.34
CDC34P49427 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.9□□□□□ -0.34
CDC34P49427 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 AC145285.6-201ENST00000604632 637 ntBASIC12.9□□□□□ -0.34
CDC34P49427 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CDC34P49427 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDC34P49427 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CDC34P49427 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC34P49427 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDC34P49427 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CDC34P49427 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC34P49427 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDC34P49427 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.89□□□□□ -0.35
CDC34P49427 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 AC087481.3-201ENST00000602886 1894 ntBASIC12.89□□□□□ -0.35
CDC34P49427 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.89□□□□□ -0.35
CDC34P49427 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC34P49427 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CDC34P49427 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDC34P49427 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CDC34P49427 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC34P49427 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC34P49427 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms