Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNI2P48788 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNI2P48788 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.21■□□□□ 0.67
TNNI2P48788 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.21■□□□□ 0.67
TNNI2P48788 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.21■□□□□ 0.67
TNNI2P48788 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNI2P48788 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 LINC01144-201ENST00000626198 1710 ntBASIC19.21■□□□□ 0.67
TNNI2P48788 AC005622.1-201ENST00000636801 1703 ntBASIC19.21■□□□□ 0.67
TNNI2P48788 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNNI2P48788 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNI2P48788 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNI2P48788 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.66
TNNI2P48788 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNI2P48788 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNNI2P48788 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 AC098850.1-201ENST00000419919 790 ntBASIC19.2■□□□□ 0.66
TNNI2P48788 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNI2P48788 AC234783.1-201ENST00000441761 496 ntBASIC19.2■□□□□ 0.66
TNNI2P48788 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.2■□□□□ 0.66
TNNI2P48788 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.2■□□□□ 0.66
TNNI2P48788 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.2■□□□□ 0.66
TNNI2P48788 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TNNI2P48788 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.2■□□□□ 0.66
TNNI2P48788 RARRES2P5-201ENST00000564013 466 ntBASIC19.2■□□□□ 0.66
TNNI2P48788 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.2■□□□□ 0.66
TNNI2P48788 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNNI2P48788 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNNI2P48788 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TNNI2P48788 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNI2P48788 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNNI2P48788 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 CYP4F24P-201ENST00000586049 1580 ntBASIC19.19■□□□□ 0.66
TNNI2P48788 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TNNI2P48788 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.19■□□□□ 0.66
TNNI2P48788 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNNI2P48788 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
TNNI2P48788 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNNI2P48788 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 AC022210.1-201ENST00000449856 793 ntBASIC19.19■□□□□ 0.66
TNNI2P48788 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.19■□□□□ 0.66
TNNI2P48788 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.19■□□□□ 0.66
TNNI2P48788 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 WFDC1-204ENST00000613603 549 ntBASIC19.19■□□□□ 0.66
TNNI2P48788 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.19■□□□□ 0.66
TNNI2P48788 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNI2P48788 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TNNI2P48788 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNI2P48788 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TNNI2P48788 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 CLK3P2-201ENST00000427566 1453 ntBASIC19.18■□□□□ 0.66
TNNI2P48788 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.18■□□□□ 0.66
TNNI2P48788 AL512343.1-201ENST00000605837 169 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms