Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 BX842568.4-201ENST00000421222 227 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 TIMM8BP1-201ENST00000452384 211 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC105233.2-201ENST00000523697 349 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 AF228730.5-201ENST00000530288 346 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC005829.1-201ENST00000570002 483 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 MIR3687-2-201ENST00000577708 61 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC027307.2-201ENST00000591252 911 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 AL365330.1-201ENST00000607459 531 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC026120.1-201ENST00000611536 926 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 MIR3687-1-201ENST00000614492 61 ntBASIC14.49□□□□□ -0.09
CSNK1A1P48729 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSNK1A1P48729 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1A1P48729 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 ADH5P3-201ENST00000433842 1137 ntBASIC14.48□□□□□ -0.09
CSNK1A1P48729 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 CEND1P1-201ENST00000451006 455 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms