Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 MTDHP5-201ENST00000598980 586 ntBASIC16.48■□□□□ 0.23
HADHAP40939 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 AC016027.1-202ENST00000607927 1699 ntBASIC16.48■□□□□ 0.23
HADHAP40939 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
HADHAP40939 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.48■□□□□ 0.23
HADHAP40939 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
HADHAP40939 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HADHAP40939 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HADHAP40939 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HADHAP40939 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HADHAP40939 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HADHAP40939 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
HADHAP40939 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
HADHAP40939 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HADHAP40939 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HADHAP40939 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
HADHAP40939 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 AC091812.2-201ENST00000619081 385 ntBASIC16.47■□□□□ 0.23
HADHAP40939 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HADHAP40939 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HADHAP40939 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HADHAP40939 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 U82695.1-201ENST00000635752 1889 ntBASIC16.46■□□□□ 0.23
HADHAP40939 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HADHAP40939 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HADHAP40939 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 FAM86C2P-203ENST00000528684 1004 ntBASIC16.46■□□□□ 0.23
HADHAP40939 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.46■□□□□ 0.23
HADHAP40939 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.46■□□□□ 0.23
HADHAP40939 RARRES2P8-201ENST00000566335 367 ntBASIC16.46■□□□□ 0.23
HADHAP40939 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.46■□□□□ 0.23
HADHAP40939 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.46■□□□□ 0.23
HADHAP40939 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.46■□□□□ 0.23
HADHAP40939 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms