Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC6A4P31645 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC6A4P31645 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 TSPY16P-201ENST00000449843 468 ntBASIC16.61■□□□□ 0.25
SLC6A4P31645 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 AC010336.2-201ENST00000564226 506 ntBASIC16.61■□□□□ 0.25
SLC6A4P31645 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 LINC02084-201ENST00000606069 1096 ntBASIC16.61■□□□□ 0.25
SLC6A4P31645 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A4P31645 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A4P31645 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A4P31645 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A4P31645 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC6A4P31645 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC6A4P31645 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC6A4P31645 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 AC236430.1-201ENST00000402231 743 ntBASIC16.6■□□□□ 0.25
SLC6A4P31645 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A4P31645 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A4P31645 RN7SL204P-201ENST00000582831 262 ntBASIC16.6■□□□□ 0.25
SLC6A4P31645 AC008738.7-201ENST00000609744 511 ntBASIC16.6■□□□□ 0.25
SLC6A4P31645 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
SLC6A4P31645 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A4P31645 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A4P31645 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC6A4P31645 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A4P31645 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A4P31645 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC6A4P31645 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC6A4P31645 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
SLC6A4P31645 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 AC006449.5-201ENST00000610658 2098 ntBASIC16.59■□□□□ 0.25
SLC6A4P31645 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A4P31645 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A4P31645 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A4P31645 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms