Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.86■□□□□ 0.13
EPHA3P29320 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 AL160237.2-201ENST00000556165 472 ntBASIC15.86■□□□□ 0.13
EPHA3P29320 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.86■□□□□ 0.13
EPHA3P29320 AC006557.2-201ENST00000592985 1240 ntBASIC15.86■□□□□ 0.13
EPHA3P29320 GGTLC5P-201ENST00000617623 998 ntBASIC15.86■□□□□ 0.13
EPHA3P29320 AC093458.2-201ENST00000623150 629 ntBASIC15.86■□□□□ 0.13
EPHA3P29320 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
EPHA3P29320 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA3P29320 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 AC006486.2-201ENST00000624246 2199 ntBASIC15.86■□□□□ 0.13
EPHA3P29320 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA3P29320 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
EPHA3P29320 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHA3P29320 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 LAGE3P1-201ENST00000425356 484 ntBASIC15.85■□□□□ 0.13
EPHA3P29320 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHA3P29320 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHA3P29320 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA3P29320 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA3P29320 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
EPHA3P29320 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA3P29320 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
EPHA3P29320 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 AC012569.1-201ENST00000591191 1524 ntBASIC15.84■□□□□ 0.13
EPHA3P29320 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms