Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GDF1P27539 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.72□□□□□ -0.05
GDF1P27539 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.72□□□□□ -0.05
GDF1P27539 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.72□□□□□ -0.05
GDF1P27539 BANF1P1-201ENST00000553684 263 ntBASIC14.72□□□□□ -0.05
GDF1P27539 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.72□□□□□ -0.05
GDF1P27539 MIR3197-201ENST00000582241 73 ntBASIC14.72□□□□□ -0.05
GDF1P27539 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GDF1P27539 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
GDF1P27539 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GDF1P27539 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GDF1P27539 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
GDF1P27539 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
GDF1P27539 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
GDF1P27539 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.71□□□□□ -0.05
GDF1P27539 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GDF1P27539 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 MIR4745-201ENST00000577608 62 ntBASIC14.71□□□□□ -0.05
GDF1P27539 MIR4321-201ENST00000592276 80 ntBASIC14.71□□□□□ -0.05
GDF1P27539 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.71□□□□□ -0.05
GDF1P27539 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.71□□□□□ -0.05
GDF1P27539 AL590560.3-201ENST00000623350 461 ntBASIC14.71□□□□□ -0.05
GDF1P27539 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GDF1P27539 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.71□□□□□ -0.06
GDF1P27539 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.71□□□□□ -0.06
GDF1P27539 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
GDF1P27539 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDF1P27539 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.7□□□□□ -0.06
GDF1P27539 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms