Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.62■□□□□ 0.73
KCNA3P22001 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 AC067852.2-201ENST00000590513 2313 ntBASIC19.62■□□□□ 0.73
KCNA3P22001 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNA3P22001 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 AC138932.1-201ENST00000534164 6830 ntBASIC19.61■□□□□ 0.73
KCNA3P22001 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KCNA3P22001 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KCNA3P22001 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNA3P22001 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNA3P22001 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 AC253536.4-201ENST00000440539 267 ntBASIC19.61■□□□□ 0.73
KCNA3P22001 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNA3P22001 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.61■□□□□ 0.73
KCNA3P22001 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 RN7SL769P-201ENST00000469386 295 ntBASIC19.61■□□□□ 0.73
KCNA3P22001 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNA3P22001 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 SPCS2P2-201ENST00000603270 608 ntBASIC19.61■□□□□ 0.73
KCNA3P22001 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA3P22001 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA3P22001 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KCNA3P22001 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KCNA3P22001 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 AHCYP2-201ENST00000430630 1300 ntBASIC19.6■□□□□ 0.73
KCNA3P22001 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.6■□□□□ 0.73
KCNA3P22001 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KCNA3P22001 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
KCNA3P22001 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA3P22001 RPS2P36-201ENST00000456516 831 ntBASIC19.6■□□□□ 0.73
KCNA3P22001 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA3P22001 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.6■□□□□ 0.73
KCNA3P22001 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.6■□□□□ 0.73
KCNA3P22001 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA3P22001 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA3P22001 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA3P22001 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
KCNA3P22001 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.59■□□□□ 0.73
KCNA3P22001 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.59■□□□□ 0.73
KCNA3P22001 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA3P22001 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
KCNA3P22001 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
KCNA3P22001 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 BNIP3P1-202ENST00000550043 1585 ntBASIC19.59■□□□□ 0.73
KCNA3P22001 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA3P22001 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms