Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC079140.1-201ENST00000508039 487 ntBASIC16.54■□□□□ 0.24
NFKB1P19838 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.54■□□□□ 0.24
NFKB1P19838 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 CICP6-201ENST00000457191 2729 ntBASIC16.54■□□□□ 0.24
NFKB1P19838 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
NFKB1P19838 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 AC008677.1-201ENST00000519230 1561 ntBASIC16.53■□□□□ 0.24
NFKB1P19838 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 AC142381.1-201ENST00000426099 345 ntBASIC16.53■□□□□ 0.24
NFKB1P19838 ACTG1P14-201ENST00000446382 1122 ntBASIC16.53■□□□□ 0.24
NFKB1P19838 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.53■□□□□ 0.24
NFKB1P19838 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.53■□□□□ 0.24
NFKB1P19838 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 MIR4321-201ENST00000592276 80 ntBASIC16.53■□□□□ 0.24
NFKB1P19838 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
NFKB1P19838 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.53■□□□□ 0.24
NFKB1P19838 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.53■□□□□ 0.24
NFKB1P19838 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NFKB1P19838 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
NFKB1P19838 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NFKB1P19838 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 HAUS4P1-201ENST00000406739 1145 ntBASIC16.52■□□□□ 0.24
NFKB1P19838 AC098859.1-201ENST00000502915 1238 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms