Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.83□□□□□ -0.2
HIST1H1DP16402 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 AC021097.1-201ENST00000607902 574 ntBASIC13.83□□□□□ -0.2
HIST1H1DP16402 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST1H1DP16402 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST1H1DP16402 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 HAUS4P1-201ENST00000406739 1145 ntBASIC13.82□□□□□ -0.2
HIST1H1DP16402 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 AC107918.4-202ENST00000641623 219 ntBASIC13.82□□□□□ -0.2
HIST1H1DP16402 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H1DP16402 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H1DP16402 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1DP16402 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1DP16402 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1DP16402 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1DP16402 AL109954.1-202ENST00000564051 2148 ntBASIC13.81□□□□□ -0.2
HIST1H1DP16402 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1DP16402 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1DP16402 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms