Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 AC068418.2-201ENST00000577309 3703 ntBASIC18.34■□□□□ 0.53
GCFC2P16383 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 AL513523.2-202ENST00000427283 2040 ntBASIC18.34■□□□□ 0.53
GCFC2P16383 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.34■□□□□ 0.53
GCFC2P16383 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.34■□□□□ 0.53
GCFC2P16383 AC105021.1-202ENST00000570572 669 ntBASIC18.34■□□□□ 0.53
GCFC2P16383 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.34■□□□□ 0.53
GCFC2P16383 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
GCFC2P16383 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GCFC2P16383 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GCFC2P16383 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.34■□□□□ 0.53
GCFC2P16383 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.34■□□□□ 0.53
GCFC2P16383 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCFC2P16383 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.33■□□□□ 0.53
GCFC2P16383 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
GCFC2P16383 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GCFC2P16383 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCFC2P16383 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.33■□□□□ 0.53
GCFC2P16383 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCFC2P16383 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GCFC2P16383 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
GCFC2P16383 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GCFC2P16383 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GCFC2P16383 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.33■□□□□ 0.53
GCFC2P16383 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
GCFC2P16383 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.33■□□□□ 0.53
GCFC2P16383 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GCFC2P16383 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GCFC2P16383 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.33■□□□□ 0.52
GCFC2P16383 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.33■□□□□ 0.52
GCFC2P16383 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.33■□□□□ 0.52
GCFC2P16383 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.33■□□□□ 0.52
GCFC2P16383 BANF1P1-201ENST00000553684 263 ntBASIC18.33■□□□□ 0.52
GCFC2P16383 AC243562.2-201ENST00000561247 970 ntBASIC18.33■□□□□ 0.52
GCFC2P16383 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.33■□□□□ 0.52
GCFC2P16383 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
GCFC2P16383 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.33■□□□□ 0.52
GCFC2P16383 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GCFC2P16383 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.33■□□□□ 0.52
GCFC2P16383 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GCFC2P16383 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GCFC2P16383 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 PCDH8P1-201ENST00000428983 2773 ntBASIC18.32■□□□□ 0.52
GCFC2P16383 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GCFC2P16383 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.32■□□□□ 0.52
GCFC2P16383 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
GCFC2P16383 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.32■□□□□ 0.52
GCFC2P16383 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.32■□□□□ 0.52
GCFC2P16383 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.32■□□□□ 0.52
GCFC2P16383 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.32■□□□□ 0.52
GCFC2P16383 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.32■□□□□ 0.52
GCFC2P16383 AC051619.7-201ENST00000568314 623 ntBASIC18.32■□□□□ 0.52
GCFC2P16383 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.32■□□□□ 0.52
GCFC2P16383 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.32■□□□□ 0.52
GCFC2P16383 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.32■□□□□ 0.52
GCFC2P16383 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GCFC2P16383 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms