Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 RPS2P1-201ENST00000434010 821 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA4P12838 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 AC025062.2-201ENST00000605477 670 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DEFA4P12838 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 MST1L-201ENST00000442552 2185 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 AC126177.1-201ENST00000547829 2218 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.29□□□□□ -0.28
DEFA4P12838 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.29□□□□□ -0.28
DEFA4P12838 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
DEFA4P12838 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 AC006504.4-201ENST00000592118 1568 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
DEFA4P12838 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
DEFA4P12838 AC006277.1-201ENST00000624348 1610 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 ELK2BP-201ENST00000415014 1224 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.29□□□□□ -0.28
DEFA4P12838 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 HLA-J-202ENST00000469281 1241 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.29□□□□□ -0.28
DEFA4P12838 RNPS1P1-201ENST00000507437 918 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.29□□□□□ -0.28
DEFA4P12838 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.29□□□□□ -0.28
DEFA4P12838 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.29□□□□□ -0.28
DEFA4P12838 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.29□□□□□ -0.28
DEFA4P12838 AL805961.1-202ENST00000641562 540 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 AL596087.1-201ENST00000400979 1969 ntBASIC13.29□□□□□ -0.28
DEFA4P12838 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA4P12838 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
DEFA4P12838 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.28□□□□□ -0.28
DEFA4P12838 AC006538.1-201ENST00000567905 1585 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms