Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB40ALP0C0E4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 AC060834.1-201ENST00000443027 2032 ntBASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB40ALP0C0E4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 SERBP1P3-201ENST00000459980 809 ntBASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CR383656.12-201ENST00000549567 513 ntBASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AL603756.1-201ENST00000606511 2163 ntBASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AC008738.7-201ENST00000609744 511 ntBASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 AC025048.6-201ENST00000634326 1161 ntBASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms