Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 AC241585.1-201ENST00000433527 519 ntBASIC14.74□□□□□ -0.05
FREM3P0C091 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.74□□□□□ -0.05
FREM3P0C091 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.74□□□□□ -0.05
FREM3P0C091 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.74□□□□□ -0.05
FREM3P0C091 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FREM3P0C091 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
FREM3P0C091 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
FREM3P0C091 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 AC026691.1-201ENST00000602502 2017 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.73□□□□□ -0.05
FREM3P0C091 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.73□□□□□ -0.05
FREM3P0C091 AZGP1P1-201ENST00000411909 902 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 AC002472.2-201ENST00000442739 958 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 AC027369.6-201ENST00000525520 931 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 AC018529.1-201ENST00000613063 361 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
FREM3P0C091 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
FREM3P0C091 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
FREM3P0C091 FO538757.1-201ENST00000623083 1397 ntBASIC14.73□□□□□ -0.05
FREM3P0C091 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FREM3P0C091 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 CNN2P2-201ENST00000443536 909 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 CNN2P3-201ENST00000450201 906 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.72□□□□□ -0.05
FREM3P0C091 LINC02084-201ENST00000606069 1096 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 AL136317.3-201ENST00000618497 906 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.72□□□□□ -0.05
FREM3P0C091 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
FREM3P0C091 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 AC022144.1-201ENST00000602255 1580 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.72□□□□□ -0.05
FREM3P0C091 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
FREM3P0C091 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.72□□□□□ -0.05
FREM3P0C091 RARRES2P9-201ENST00000565168 469 ntBASIC14.72□□□□□ -0.05
FREM3P0C091 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.72□□□□□ -0.05
FREM3P0C091 AC008761.3-201ENST00000624803 892 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms