Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 RFPL4AP1-201ENST00000530883 850 ntBASIC17.81■□□□□ 0.44
CLTAP09496 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.81■□□□□ 0.44
CLTAP09496 AC027796.2-201ENST00000575326 344 ntBASIC17.81■□□□□ 0.44
CLTAP09496 AL136317.3-201ENST00000618497 906 ntBASIC17.81■□□□□ 0.44
CLTAP09496 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 Z92544.3-201ENST00000624747 417 ntBASIC17.81■□□□□ 0.44
CLTAP09496 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 AC005052.1-201ENST00000625181 2492 ntBASIC17.81■□□□□ 0.44
CLTAP09496 AL589702.1-201ENST00000641229 1509 ntBASIC17.81■□□□□ 0.44
CLTAP09496 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLTAP09496 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.8■□□□□ 0.44
CLTAP09496 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLTAP09496 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 POU5F1P6-201ENST00000466990 990 ntBASIC17.8■□□□□ 0.44
CLTAP09496 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.8■□□□□ 0.44
CLTAP09496 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.8■□□□□ 0.44
CLTAP09496 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.8■□□□□ 0.44
CLTAP09496 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CLTAP09496 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.8■□□□□ 0.44
CLTAP09496 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLTAP09496 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.8■□□□□ 0.44
CLTAP09496 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.79■□□□□ 0.44
CLTAP09496 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.79■□□□□ 0.44
CLTAP09496 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.79■□□□□ 0.44
CLTAP09496 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.79■□□□□ 0.44
CLTAP09496 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms