Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP1A1P05023 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATP1A1P05023 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 AC138035.3-201ENST00000622706 2791 ntBASIC17.35■□□□□ 0.37
ATP1A1P05023 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 RNPS1P1-201ENST00000507437 918 ntBASIC17.35■□□□□ 0.37
ATP1A1P05023 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP1A1P05023 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP1A1P05023 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.35■□□□□ 0.37
ATP1A1P05023 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP1A1P05023 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATP1A1P05023 AC004706.3-202ENST00000621574 984 ntBASIC17.35■□□□□ 0.37
ATP1A1P05023 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP1A1P05023 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP1A1P05023 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP1A1P05023 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 TMBIM7P-203ENST00000641617 1718 ntBASIC17.35■□□□□ 0.37
ATP1A1P05023 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
ATP1A1P05023 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP1A1P05023 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.35■□□□□ 0.37
ATP1A1P05023 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP1A1P05023 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 KRT18P67-201ENST00000432816 1264 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP1A1P05023 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AF186996.4-201ENST00000467186 377 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 AC079776.4-201ENST00000511039 504 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AC021087.4-201ENST00000563761 564 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.34■□□□□ 0.37
ATP1A1P05023 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AL139288.1-201ENST00000623748 933 ntBASIC17.34■□□□□ 0.37
ATP1A1P05023 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ATP1A1P05023 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP1A1P05023 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP1A1P05023 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP1A1P05023 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP1A1P05023 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP1A1P05023 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP1A1P05023 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP1A1P05023 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP1A1P05023 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATP1A1P05023 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP1A1P05023 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms