Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 ARMC10P1-201ENST00000313754 855 ntBASIC12.42□□□□□ -0.42
TCRAP04437 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 PTCHD3P3-201ENST00000403073 906 ntBASIC12.42□□□□□ -0.42
TCRAP04437 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.42□□□□□ -0.42
TCRAP04437 AC012615.1-201ENST00000565797 1299 ntBASIC12.42□□□□□ -0.42
TCRAP04437 AC139887.3-201ENST00000568585 713 ntBASIC12.42□□□□□ -0.42
TCRAP04437 NKAPP1-205ENST00000585790 367 ntBASIC12.42□□□□□ -0.42
TCRAP04437 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
TCRAP04437 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.42□□□□□ -0.42
TCRAP04437 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRAP04437 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TCRAP04437 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRAP04437 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.41□□□□□ -0.42
TCRAP04437 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRAP04437 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.41□□□□□ -0.42
TCRAP04437 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.41□□□□□ -0.42
TCRAP04437 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 FAM86EP-206ENST00000510506 987 ntBASIC12.41□□□□□ -0.42
TCRAP04437 AC107918.2-201ENST00000530817 355 ntBASIC12.41□□□□□ -0.42
TCRAP04437 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TCRAP04437 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRAP04437 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRAP04437 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms