Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 MIR940-201ENST00000401276 94 ntBASIC14.28□□□□□ -0.12
LCATP04180 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.28□□□□□ -0.12
LCATP04180 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
LCATP04180 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.28□□□□□ -0.12
LCATP04180 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.28□□□□□ -0.12
LCATP04180 PDPK2P-202ENST00000562415 1191 ntBASIC14.28□□□□□ -0.12
LCATP04180 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 TSPY26P-202ENST00000565928 3884 ntBASIC14.28□□□□□ -0.12
LCATP04180 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.28□□□□□ -0.12
LCATP04180 AL078644.1-201ENST00000609881 752 ntBASIC14.28□□□□□ -0.12
LCATP04180 FAM197Y3-203ENST00000618346 717 ntBASIC14.28□□□□□ -0.12
LCATP04180 AL513190.1-201ENST00000621254 727 ntBASIC14.28□□□□□ -0.12
LCATP04180 U82695.1-201ENST00000635752 1889 ntBASIC14.28□□□□□ -0.12
LCATP04180 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LCATP04180 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.27□□□□□ -0.12
LCATP04180 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.27□□□□□ -0.12
LCATP04180 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.27□□□□□ -0.12
LCATP04180 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.27□□□□□ -0.12
LCATP04180 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
LCATP04180 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LCATP04180 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LCATP04180 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.27□□□□□ -0.12
LCATP04180 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCATP04180 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.27□□□□□ -0.13
LCATP04180 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.27□□□□□ -0.13
LCATP04180 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.27□□□□□ -0.13
LCATP04180 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
LCATP04180 AL161645.1-201ENST00000622716 1255 ntBASIC14.27□□□□□ -0.13
LCATP04180 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LCATP04180 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.27□□□□□ -0.13
LCATP04180 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LCATP04180 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.27□□□□□ -0.13
LCATP04180 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.27□□□□□ -0.13
LCATP04180 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCATP04180 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LCATP04180 AC016027.1-202ENST00000607927 1699 ntBASIC14.26□□□□□ -0.13
LCATP04180 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LCATP04180 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LCATP04180 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LCATP04180 AC092919.2-201ENST00000623631 1645 ntBASIC14.26□□□□□ -0.13
LCATP04180 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
LCATP04180 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.26□□□□□ -0.13
LCATP04180 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms