Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 AC233702.3-201ENST00000578656 1387 ntBASIC14.07□□□□□ -0.16
HLA-DQB1P01920 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQB1P01920 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 RN7SL850P-201ENST00000579959 291 ntBASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AJ011931.1-201ENST00000618749 2492 ntBASIC14.06□□□□□ -0.16
HLA-DQB1P01920 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 AC005252.3-201ENST00000623855 2258 ntBASIC14.06□□□□□ -0.16
HLA-DQB1P01920 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQB1P01920 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 RCN1P2-201ENST00000398357 915 ntBASIC14.05□□□□□ -0.16
HLA-DQB1P01920 RCN1P1-201ENST00000400413 996 ntBASIC14.05□□□□□ -0.16
HLA-DQB1P01920 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 Z69720.1-201ENST00000601483 472 ntBASIC14.05□□□□□ -0.16
HLA-DQB1P01920 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms