Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPTM1O96005 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 LINC00895-201ENST00000629028 1637 ntBASIC15.43■□□□□ 0.06
CLPTM1O96005 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPTM1O96005 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPTM1O96005 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLPTM1O96005 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 AL137784.3-201ENST00000623858 2288 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLPTM1O96005 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 AC233702.3-201ENST00000578656 1387 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 AC112698.1-201ENST00000510299 916 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 AC011840.4-201ENST00000578471 627 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.42■□□□□ 0.06
CLPTM1O96005 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.42■□□□□ 0.06
CLPTM1O96005 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 AC005840.4-201ENST00000541242 2494 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPTM1O96005 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 AC020658.6-201ENST00000623564 1870 ntBASIC15.42■□□□□ 0.06
CLPTM1O96005 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLPTM1O96005 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPTM1O96005 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLPTM1O96005 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLPTM1O96005 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CLPTM1O96005 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLPTM1O96005 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 MTCL1P1-201ENST00000446207 792 ntBASIC15.41■□□□□ 0.06
CLPTM1O96005 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 AP005901.3-202ENST00000581653 237 ntBASIC15.41■□□□□ 0.06
CLPTM1O96005 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.41■□□□□ 0.06
CLPTM1O96005 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.41■□□□□ 0.06
CLPTM1O96005 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.41■□□□□ 0.06
CLPTM1O96005 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.41■□□□□ 0.06
CLPTM1O96005 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLPTM1O96005 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPTM1O96005 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPTM1O96005 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 359.9 ms