Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.68■□□□□ 0.58
MBD3O95983 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
MBD3O95983 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3O95983 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3O95983 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MBD3O95983 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MBD3O95983 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD3O95983 AC093827.2-201ENST00000512654 315 ntBASIC18.67■□□□□ 0.58
MBD3O95983 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3O95983 AC139887.3-201ENST00000568585 713 ntBASIC18.67■□□□□ 0.58
MBD3O95983 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3O95983 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3O95983 AC004706.3-202ENST00000621574 984 ntBASIC18.67■□□□□ 0.58
MBD3O95983 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD3O95983 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MBD3O95983 AC105250.1-201ENST00000509378 2057 ntBASIC18.67■□□□□ 0.58
MBD3O95983 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3O95983 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3O95983 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3O95983 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 AC090616.6-203ENST00000579186 1945 ntBASIC18.66■□□□□ 0.58
MBD3O95983 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.66■□□□□ 0.58
MBD3O95983 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MBD3O95983 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD3O95983 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD3O95983 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD3O95983 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD3O95983 AL591684.3-201ENST00000605187 298 ntBASIC18.66■□□□□ 0.58
MBD3O95983 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 AL805961.1-202ENST00000641562 540 ntBASIC18.66■□□□□ 0.58
MBD3O95983 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MBD3O95983 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MBD3O95983 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3O95983 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms