Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 CNN2P2-201ENST00000443536 909 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 AC093724.1-201ENST00000448659 1027 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.49□□□□□ -0.09
CNOT4O95628 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.49□□□□□ -0.09
CNOT4O95628 CNN2P3-201ENST00000450201 906 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 SLC25A39P2-201ENST00000537614 270 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CNOT4O95628 AL136317.3-201ENST00000618497 906 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.49□□□□□ -0.09
CNOT4O95628 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CNOT4O95628 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 AC078925.2-201ENST00000624013 1973 ntBASIC14.49□□□□□ -0.09
CNOT4O95628 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CNOT4O95628 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 HLA-A-202ENST00000376806 1854 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CNOT4O95628 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CNOT4O95628 FAM220BP-201ENST00000377689 816 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CNOT4O95628 FAM58DP-201ENST00000428076 619 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 GPS2P2-201ENST00000430745 888 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 RBPMS2P1-201ENST00000437762 623 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 POU5F1P6-201ENST00000466990 990 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 RNA5SP421-201ENST00000516864 134 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.48□□□□□ -0.09
CNOT4O95628 ALG1L8P-201ENST00000533887 760 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 AC069262.1-201ENST00000539058 672 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 AC190387.1-201ENST00000551683 408 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.48□□□□□ -0.09
CNOT4O95628 AL138918.1-201ENST00000568306 659 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.48□□□□□ -0.09
CNOT4O95628 SPTSSB-204ENST00000617024 1292 ntBASIC14.48□□□□□ -0.09
CNOT4O95628 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CNOT4O95628 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.48□□□□□ -0.09
CNOT4O95628 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CNOT4O95628 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CNOT4O95628 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 AL365209.1-201ENST00000624418 6473 ntBASIC14.47□□□□□ -0.09
CNOT4O95628 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms