Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
LCMT2O60294 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LCMT2O60294 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.54■□□□□ 0.08
LCMT2O60294 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.54■□□□□ 0.08
LCMT2O60294 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 AL513523.2-202ENST00000427283 2040 ntBASIC15.54■□□□□ 0.08
LCMT2O60294 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LCMT2O60294 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
LCMT2O60294 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LCMT2O60294 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LCMT2O60294 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.53■□□□□ 0.08
LCMT2O60294 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LCMT2O60294 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 TSEN15P1-201ENST00000423257 515 ntBASIC15.53■□□□□ 0.08
LCMT2O60294 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.53■□□□□ 0.08
LCMT2O60294 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.53■□□□□ 0.08
LCMT2O60294 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.53■□□□□ 0.08
LCMT2O60294 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
LCMT2O60294 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.53■□□□□ 0.08
LCMT2O60294 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.53■□□□□ 0.08
LCMT2O60294 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.53■□□□□ 0.08
LCMT2O60294 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 AP001059.3-201ENST00000619053 235 ntBASIC15.53■□□□□ 0.08
LCMT2O60294 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LCMT2O60294 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.53■□□□□ 0.08
LCMT2O60294 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.53■□□□□ 0.08
LCMT2O60294 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LCMT2O60294 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LCMT2O60294 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms