Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 RPL37AP1-201ENST00000412502 279 ntBASIC16.42■□□□□ 0.22
KDELR3O43731 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.42■□□□□ 0.22
KDELR3O43731 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 AL390955.2-201ENST00000603032 514 ntBASIC16.42■□□□□ 0.22
KDELR3O43731 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
KDELR3O43731 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDELR3O43731 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.42■□□□□ 0.22
KDELR3O43731 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 KRT8P12-202ENST00000472924 1397 ntBASIC16.41■□□□□ 0.22
KDELR3O43731 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KDELR3O43731 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
KDELR3O43731 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.41■□□□□ 0.22
KDELR3O43731 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KDELR3O43731 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.41■□□□□ 0.22
KDELR3O43731 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
KDELR3O43731 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDELR3O43731 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDELR3O43731 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
KDELR3O43731 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
KDELR3O43731 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KDELR3O43731 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.4■□□□□ 0.22
KDELR3O43731 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.4■□□□□ 0.22
KDELR3O43731 BNIP3P1-202ENST00000550043 1585 ntBASIC16.4■□□□□ 0.22
KDELR3O43731 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KDELR3O43731 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.4■□□□□ 0.22
KDELR3O43731 AL080243.2-201ENST00000418783 582 ntBASIC16.4■□□□□ 0.22
KDELR3O43731 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.4■□□□□ 0.22
KDELR3O43731 IGHV3-42-201ENST00000520410 361 ntBASIC16.4■□□□□ 0.22
KDELR3O43731 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.4■□□□□ 0.22
KDELR3O43731 AC005498.2-205ENST00000593218 784 ntBASIC16.4■□□□□ 0.22
KDELR3O43731 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.4■□□□□ 0.22
KDELR3O43731 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KDELR3O43731 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDELR3O43731 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms