Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
KCNQ3O43525 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNQ3O43525 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCNQ3O43525 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AC245100.5-201ENST00000452108 331 ntBASIC20.65■□□□□ 0.9
KCNQ3O43525 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNQ3O43525 RARRES2P5-201ENST00000564013 466 ntBASIC20.65■□□□□ 0.9
KCNQ3O43525 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AC093726.1-201ENST00000608064 963 ntBASIC20.65■□□□□ 0.9
KCNQ3O43525 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCNQ3O43525 RPSAP52-203ENST00000622976 1023 ntBASIC20.65■□□□□ 0.9
KCNQ3O43525 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KCNQ3O43525 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNQ3O43525 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ3O43525 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KCNQ3O43525 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNQ3O43525 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNQ3O43525 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KCNQ3O43525 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNQ3O43525 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
KCNQ3O43525 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ3O43525 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 AC243562.2-201ENST00000561247 970 ntBASIC20.64■□□□□ 0.89
KCNQ3O43525 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
KCNQ3O43525 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ3O43525 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
KCNQ3O43525 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ3O43525 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ3O43525 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 CLK3P2-201ENST00000427566 1453 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNQ3O43525 AC112492.5-201ENST00000421897 457 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 MEP1AP4-201ENST00000423244 1087 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ3O43525 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNQ3O43525 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 TIMM17BP1-201ENST00000545713 516 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 AL158212.4-201ENST00000624062 1286 ntBASIC20.63■□□□□ 0.89
KCNQ3O43525 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNQ3O43525 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KCNQ3O43525 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ3O43525 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ3O43525 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ3O43525 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ3O43525 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ3O43525 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
KCNQ3O43525 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms